FastTree 2.2 (doc)

1. Overview
2. Data & Settings
3. Results

Approximately maximum-likelihood tree inference with local support values. Program documentation.

Upload or paste FASTA, PHYLIP, Clustal, NEXUS, EMBL or GenBank sequences. Up to 200 sequences, 6000 nucleotide or 2000 amino-acid positions. Sequences must already be aligned.

Branch support values are SH-like local support, not conventional bootstrap proportions. Automatic model: GTR for nucleotides, JTT for proteins.

Name of the analysis:

Upload your alignment (FASTA, Phylip, Clustal, EMBL or NEXUS format) from a file:

Or paste it here

Settings

Sequence type:

Model:

Gamma likelihood rescaling

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Analysis files are retained for 30 days from submission. Download your results before the expiration date. Retention and deletion.

phylogeny.atgc-montpellier.fr is provided by the ATGC bioinformatics platform.