Equipe MAB - LIRMM Information Genomique et Structurale
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"One Click" Mode
Alignment
MUSCLE
->
Phylogeny
PhyML
->
Tree Rendering
TreeDyn
Alignment
MUSCLE
->
Curation
Gblocks
->
Phylogeny
PhyML
->
Tree Rendering
TreeDyn
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Maximum number of sequences is 200 for proteins and 200 for nucleic acids.
Maximum length of sequences is 2000 for proteins and 6000 for nucleic acids.

Note: MUSCLE aligns the sequences, optional Gblocks curation removes poorly aligned positions, PhyML infers the tree, and TreeDyn displays the result.

The default branch support is the SH-like approximate likelihood-ratio test. DNA uses HKY85 and proteins use WAG, with four rate categories and estimated gamma and invariable sites.

Analysis files are retained for 30 days from submission. Download your results before the expiration date. Retention and deletion.

ATGC — Montpellier Bioinformatics Platform

phylogeny.atgc-montpellier.fr is provided by the ATGC bioinformatics platform.

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