| FastME |
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FastME
Infer and refine a phylogenetic tree using evolutionary distances.
Default settings
| Parameter | Default value |
|---|---|
| Input data type | DNA alignment |
| Number of data sets | 1 |
| Gamma distributed rates across sites | Yes |
| Gamma shape parameter | 1.0 |
| Substitution model (DNA) | F84 |
| Substitution model (Protein) | LG |
| Use starting topology | No |
| Mode | Tree Refinement |
| Tree topology improvement | NNI_BalME |
| Branch length type | BalLS |
| Algorithm | BioNJ |
| Tree refinement | NNI_BalME |
| Perform bootstrap | 0 |
Enter data and configure this analysis
See the documentation for input formats, result downloads and scientific references.
phylogeny.atgc-montpellier.fr is provided by the ATGC bioinformatics platform.
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